SIM

This is the development version of SIM; for the stable release version, see SIM.

Integrated Analysis on two human genomic datasets

Bioconductor version: Development (3.21)

Finds associations between two human genomic datasets.

Author: Renee X. de Menezes and Judith M. Boer

Maintainer: Renee X. de Menezes <r.menezes at nki.nl>

Citation (from within R, enter citation("SIM")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("SIM")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SIM")

SIM vignette	PDF	R Script
Reference Manual	PDF

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Microarray, Software, Visualization
Version	1.77.0
In Bioconductor since	BioC 2.3 (R-2.8) (16 years)
License	GPL (>= 2)
Depends	R (>= 3.5), quantreg
Imports	graphics, stats, globaltest, quantsmooth
System Requirements
URL

Suggests	biomaRt, RColorBrewer
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	SIM_1.77.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/SIM
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/SIM
Bioc Package Browser	https://code.bioconductor.org/browse/SIM/
Package Short Url	https://bioconductor.org/packages/SIM/
Package Downloads Report	Download Stats