goProfiles
This is the development version of goProfiles; for the stable release version, see goProfiles.
goProfiles: an R package for the statistical analysis of functional profiles
Bioconductor version: Development (3.21)
The package implements methods to compare lists of genes based on comparing the corresponding 'functional profiles'.
Author: Alex Sanchez, Jordi Ocana and Miquel Salicru
Maintainer: Alex Sanchez <asanchez at ub.edu>
Citation (from within R, enter
citation("goProfiles")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("goProfiles")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("goProfiles")| goProfiles Vignette | R Script | |
| goProfiles-comparevisual.pdf | ||
| goProfiles-plotProfileMF.pdf | ||
| Reference Manual |
Details
| biocViews | Annotation, GO, GeneExpression, GeneSetEnrichment, GraphAndNetwork, Microarray, MultipleComparison, Pathways, Software |
| Version | 1.69.0 |
| In Bioconductor since | BioC 2.2 (R-2.7) (16.5 years) |
| License | GPL-2 |
| Depends | Biobase, AnnotationDbi, GO.db, CompQuadForm, stringr |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | org.Hs.eg.db |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | goSorensen |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | goProfiles_1.69.0.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/goProfiles |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/goProfiles |
| Bioc Package Browser | https://code.bioconductor.org/browse/goProfiles/ |
| Package Short Url | https://bioconductor.org/packages/goProfiles/ |
| Package Downloads Report | Download Stats |