1#ifndef VIENNA_RNA_PACKAGE_FILE_FORMATS_H
2#define VIENNA_RNA_PACKAGE_FILE_FORMATS_H
4#ifdef VRNA_WARN_DEPRECATED
6# define DEPRECATED(func, msg) func __attribute__ ((deprecated("", msg)))
7# elif defined(__GNUC__)
8# define DEPRECATED(func, msg) func __attribute__ ((deprecated(msg)))
10# define DEPRECATED(func, msg) func
13# define DEPRECATED(func, msg) func
74 const char *identifier,
104 const char *identifier,
116#define VRNA_OPTION_MULTILINE 32U
121#define VRNA_CONSTRAINT_MULTILINE 32U
197 unsigned int options);
220 unsigned int option);
238 double default_value,
242#define VRNA_INPUT_VERBOSE 16384U
246vrna_file_connect_read_record(FILE *fp,
251 unsigned int options);
254vrna_file_RNAstrand_db_read_record(FILE *fp,
261 unsigned int options);
263#ifndef VRNA_DISABLE_BACKWARD_COMPATIBILITY
285 unsigned int option),
286 "This function is obsolete");
292DEPRECATED(
char *extract_record_rest_structure(
const char **lines,
294 unsigned int option),
295 "Use vrna_extract_record_rest_structure() instead");
306 unsigned int options),
307 "Use vrna_file_fasta_read_record() instead");
310DEPRECATED(
unsigned int get_multi_input_line(
char **
string,
311 unsigned int options),
312 "This function is obsolete");
Various data structures and pre-processor macros.