RNAlib-2.6.3
 
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Functions to compute salt correction. More...

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Functions

double vrna_salt_loop (int L, double salt, double T, double backbonelen)
 Get salt correction for a loop at a given salt concentration and temperature.
 
int vrna_salt_loop_int (int L, double salt, double T, double backbonelen)
 Get salt correction for a loop at a given salt concentration and temperature.
 
int vrna_salt_stack (double salt, double T, double hrise)
 Get salt correction for a stack at a given salt concentration and temperature.
 
void vrna_salt_ml (double saltLoop[], int lower, int upper, int *m, int *b)
 Fit linear function to loop salt correction.
 
int vrna_salt_duplex_init (vrna_md_t *md)
 Get salt correction for duplex initialization at a given salt concentration.
 

Detailed Description

Functions to compute salt correction.