RNAlib-2.6.3
 
Loading...
Searching...
No Matches
Annotation

Functions to generate annotations for Secondary Structure Plots, Dot-Plots, and Others. More...

Detailed Description

Functions to generate annotations for Secondary Structure Plots, Dot-Plots, and Others.

+ Collaboration diagram for Annotation:

Functions

char ** vrna_annotate_covar_db (const char **alignment, const char *structure, vrna_md_t *md_p)
 Produce covariance annotation for an alignment given a secondary structure.
 
vrna_cpair_tvrna_annotate_covar_pairs (const char **alignment, vrna_ep_t *pl, vrna_ep_t *mfel, double threshold, vrna_md_t *md)
 Produce covariance annotation for an alignment given a set of base pairs.
 

Function Documentation

◆ vrna_annotate_covar_db()

char ** vrna_annotate_covar_db ( const char **  alignment,
const char *  structure,
vrna_md_t md_p 
)

#include <ViennaRNA/plotting/utils.h>

Produce covariance annotation for an alignment given a secondary structure.

◆ vrna_annotate_covar_pairs()

vrna_cpair_t * vrna_annotate_covar_pairs ( const char **  alignment,
vrna_ep_t pl,
vrna_ep_t mfel,
double  threshold,
vrna_md_t md 
)

#include <ViennaRNA/plotting/utils.h>

Produce covariance annotation for an alignment given a set of base pairs.