Energy evaluation of multibranch loops for MFE and partition function calculations. More...
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Functions | |
int | vrna_BT_mb_loop (vrna_fold_compound_t *fc, int *i, int *j, int *k, int en, int *component1, int *component2) |
Backtrack the decomposition of a multi branch loop closed by ![]() | |
Basic free energy interface | |
int | vrna_E_mb_loop_stack (vrna_fold_compound_t *fc, int i, int j) |
Evaluate energy of a multi branch helices stacking onto closing pair (i,j) | |
Boltzmann weight (partition function) interface | |
typedef struct vrna_mx_pf_aux_ml_s * | vrna_mx_pf_aux_ml_t |
Auxiliary helper arrays for fast exterior loop computations. | |
Energy evaluation of multibranch loops for MFE and partition function calculations.
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