RNAlib-2.6.3
 
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constraints Directory Reference
+ Directory dependency graph for constraints:

Files

 basic.h
 Functions and data structures for constraining secondary structure predictions and evaluation.
 
 hard.h
 Functions and data structures for handling of secondary structure hard constraints.
 
 ligand.h
 Functions for incorporation of ligands binding to hairpin and interior loop motifs using the soft constraints framework.
 
 sc_cb_intern.h
 
 SHAPE.h
 This module provides function to incorporate SHAPE reactivity data into the folding recursions by means of soft constraints.
 
 soft.h
 Functions and data structures for secondary structure soft constraints.
 
 soft_special.h
 Specialized implementations that utilize the soft constraint callback mechanism.