To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ABSSeq")
In most cases, you don't need to download the package archive at all.
ABSSeq
|
This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see ABSSeq.
ABSSeq: a new RNA-Seq analysis method based on absolute expression differences and generalized Poisson model
Bioconductor version: 3.0
Inferring differential expression genes by absolute expression differences between two groups, utilizing generalized Poisson model to account for over-dispersion across samples and heterogeneity of differential expression across genes.
Author: Wentao Yang
Maintainer: Wentao Yang <wyang at zoologie.uni-kiel.de>
Citation (from within R,
enter citation("ABSSeq")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("ABSSeq")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ABSSeq")
| R Script | ABSSeq | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | DifferentialExpression, Software |
| Version | 1.2.0 |
| In Bioconductor since | BioC 2.14 (R-3.1) (2 years) |
| License | GPL (>= 3) |
| Depends | R (>= 2.10), methods |
| Imports | Rcpp |
| LinkingTo | Rcpp |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | ABSSeq_1.2.0.tar.gz |
| Windows Binary | ABSSeq_1.2.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | ABSSeq_1.2.0.tgz |
| Mac OS X 10.9 (Mavericks) | ABSSeq_1.2.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/ABSSeq/tree/release-3.0 |
| Package Short Url | http://bioconductor.org/packages/ABSSeq/ |
| Package Downloads Report | Download Stats |
Documentation »
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