To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BEAT")

In most cases, you don't need to download the package archive at all.

BEAT

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see BEAT.

BEAT - BS-Seq Epimutation Analysis Toolkit

Bioconductor version: 3.0

Model-based analysis of single-cell methylation data

Author: Kemal Akman <akman at mpipz.mpg.de>

Maintainer: Kemal Akman <akman at mpipz.mpg.de>

Citation (from within R, enter citation("BEAT")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BEAT")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BEAT")

PDF	R Script	Analysing single-cell BS-Seq data with the "BEAT" package
PDF		Reference Manual

biocViews	DNAMethylation, Epigenetics, Genetics, MethylSeq, Software
Version	1.4.0
In Bioconductor since	BioC 2.14 (R-3.1) (2 years)
License	LGPL (>= 3.0)
Depends	R (>= 2.13.0)
Imports	GenomicRanges, ShortRead, Biostrings, BSgenome
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	BEAT_1.4.0.tar.gz
Windows Binary	BEAT_1.4.0.zip
Mac OS X 10.6 (Snow Leopard)	BEAT_1.4.0.tgz
Mac OS X 10.9 (Mavericks)	BEAT_1.4.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/BEAT/tree/release-3.0
Package Short Url	http://bioconductor.org/packages/BEAT/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: