To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BaseSpaceR")

In most cases, you don't need to download the package archive at all.

BaseSpaceR

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see BaseSpaceR.

R SDK for BaseSpace RESTful API

Bioconductor version: 3.0

A rich R interface to Illumina's BaseSpace cloud computing environment, enabling the fast development of data analysis and visualisation tools.

Author: Adrian Alexa

Maintainer: Adrian Alexa <aalexa at illumina.com>

Citation (from within R, enter citation("BaseSpaceR")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("BaseSpaceR")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BaseSpaceR")

biocViews	ConnectTools, DataImport, DataRepresentation, Genetics, HighThroughputSequencing, Infrastructure, Sequencing, Software
Version	1.10.0
In Bioconductor since	BioC 2.12 (R-3.0) (3 years)
License	Apache License 2.0
Depends	R (>= 2.15.0), RCurl, RJSONIO
Imports	methods
LinkingTo
Suggests	RUnit, IRanges, Rsamtools
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	BaseSpaceR_1.10.0.tar.gz
Windows Binary	BaseSpaceR_1.10.0.zip
Mac OS X 10.6 (Snow Leopard)	BaseSpaceR_1.10.0.tgz
Mac OS X 10.9 (Mavericks)	BaseSpaceR_1.10.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/BaseSpaceR/tree/release-3.0
Package Short Url	http://bioconductor.org/packages/BaseSpaceR/
Package Downloads Report	Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Please read the posting guide. Post questions about Bioconductor to one of the following locations: