To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SigFuge")

In most cases, you don't need to download the package archive at all.

SigFuge

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see SigFuge.

Bioconductor version: 3.0

Algorithm for testing significance of clustering in RNA-seq data.

Author: Patrick Kimes, Christopher Cabanski

Maintainer: Patrick Kimes <patrick.kimes at gmail.com>

Citation (from within R, enter citation("SigFuge")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("SigFuge")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SigFuge")

PDF	R Script	SigFuge Tutorial
PDF		Reference Manual

biocViews	Clustering, RNASeq, Software, Visualization
Version	1.4.0
In Bioconductor since	BioC 2.13 (R-3.0) (2.5 years)
License	GPL-3
Depends	R (>= 3.1.1), GenomicRanges
Imports	ggplot2, matlab, reshape, sigclust
LinkingTo
Suggests	org.Hs.eg.db, prebsdata, Rsamtools(>= 1.17.0), TxDb.Hsapiens.UCSC.hg19.knownGene, BiocStyle
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	SigFuge_1.4.0.tar.gz
Windows Binary	SigFuge_1.4.0.zip
Mac OS X 10.6 (Snow Leopard)	SigFuge_1.4.0.tgz
Mac OS X 10.9 (Mavericks)	SigFuge_1.4.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/SigFuge/tree/release-3.0
Package Short Url	http://bioconductor.org/packages/SigFuge/
Package Downloads Report	Download Stats

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