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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowCHIC")
In most cases, you don't need to download the package archive at all.
flowCHIC
|
This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see flowCHIC.
Analyze flow cytometric data using histogram information
Bioconductor version: 3.0
A package to analyze flow cytometric data of complex microbial communities based on histogram images
Author: Joachim Schumann <joachim.schumann at ufz.de>, Christin Koch <christin.koch at ufz.de>, Ingo Fetzer <info.fetzer at stockholmresilience.su.se>, Susann Müller <susann.mueller at ufz.de>
Maintainer: Author: Joachim Schumann <joachim.schumann at ufz.de>
Citation (from within R,
enter citation("flowCHIC")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowCHIC")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowCHIC")
| R Script | Analyze flow cytometric data using histogram information | |
| Reference Manual |
Details
| biocViews | CellBasedAssays, Clustering, FlowCytometry, Software, Visualization |
| Version | 1.0.2 |
| In Bioconductor since | BioC 3.0 (R-3.1) (1.5 years) |
| License | GPL-2 |
| Depends | R (>= 3.1.0) |
| Imports | methods, flowCore, EBImage, vegan, hexbin, ggplot2, grid |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | http://www.ufz.de/index.php?en=16773 |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | flowCHIC_1.0.2.tar.gz |
| Windows Binary | flowCHIC_1.0.2.zip |
| Mac OS X 10.6 (Snow Leopard) | flowCHIC_1.0.2.tgz |
| Mac OS X 10.9 (Mavericks) | flowCHIC_1.0.2.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/flowCHIC/tree/release-3.0 |
| Package Short Url | http://bioconductor.org/packages/flowCHIC/ |
| Package Downloads Report | Download Stats |
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