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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowFlowJo")
In most cases, you don't need to download the package archive at all.
flowFlowJo
|
This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see flowFlowJo.
Tools for extracting information from a FlowJo workspace and working with the data in the flowCore paradigm.
Bioconductor version: 3.0
FlowJo is a commercial GUI based software package from TreeStar Inc. for the visualization and analysis of flow cytometry data. One of the FlowJo standard export file types is the "FlowJo Workspace". This is an XML document that describes files and manipulations that have been performed in the FlowJo GUI environment. This package can take apart the FlowJo workspace and deliver the data into R in the flowCore paradigm.
Author: John J. Gosink <gosinkj at amgen.com>
Maintainer: John J. Gosink <gosinkj at amgen.com>
Citation (from within R,
enter citation("flowFlowJo")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("flowFlowJo")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("flowFlowJo")
| R Script | Basic Functions for working with FlowJo | |
| Reference Manual |
Details
| biocViews | FlowCytometry, Software |
| Version | 1.24.0 |
| In Bioconductor since | BioC 2.4 (R-2.9) (7 years) |
| License | GPL (>=3) |
| Depends | R (>= 2.5.0), MASS |
| Imports | flowCore, XML (>= 1.96), methods, Biobase |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | flowFlowJo_1.24.0.tar.gz |
| Windows Binary | flowFlowJo_1.24.0.zip |
| Mac OS X 10.6 (Snow Leopard) | flowFlowJo_1.24.0.tgz |
| Mac OS X 10.9 (Mavericks) | flowFlowJo_1.24.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/flowFlowJo/tree/release-3.0 |
| Package Short Url | http://bioconductor.org/packages/flowFlowJo/ |
| Package Downloads Report | Download Stats |
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