To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mosaics")

In most cases, you don't need to download the package archive at all.

mosaics

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see mosaics.

MOSAiCS (MOdel-based one and two Sample Analysis and Inference for ChIP-Seq)

Bioconductor version: 3.0

This package provides functions for fitting MOSAiCS, a statistical framework to analyze one-sample or two-sample ChIP-seq data.

Author: Dongjun Chung, Pei Fen Kuan, Sunduz Keles

Maintainer: Dongjun Chung <chungdon at stat.wisc.edu>

Citation (from within R, enter citation("mosaics")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("mosaics")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mosaics")

biocViews	Bioinformatics, ChIPseq, Genetics, Sequencing, Software, Transcription
Version	2.0.1
In Bioconductor since	BioC 2.8 (R-2.13) (5 years)
License	GPL (>= 2)
Depends	R (>= 3.0.0), methods, graphics, Rcpp
Imports	MASS, splines, lattice, IRanges
LinkingTo	Rcpp
Suggests	mosaicsExample
SystemRequirements	Perl
Enhances	parallel
URL	http://groups.google.com/group/mosaics_user_group
Depends On Me	jmosaics
Imports Me
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	mosaics_2.0.1.tar.gz
Windows Binary	mosaics_2.0.1.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	mosaics_2.0.1.tgz
Mac OS X 10.9 (Mavericks)	mosaics_2.0.1.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/mosaics/tree/release-3.0
Package Short Url	http://bioconductor.org/packages/mosaics/
Package Downloads Report	Download Stats

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