To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("nudge")
In most cases, you don't need to download the package archive at all.
nudge
|
This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see nudge.
Normal Uniform Differential Gene Expression detection
Bioconductor version: 3.0
Package for normalizing microarray data in single and multiple replicate experiments and fitting a normal-uniform mixture to detect differentially expressed genes in the cases where the two samples are being compared directly or indirectly (via a common reference sample)
Author: N. Dean <nemad at stat.washington.edu> and A. E. Raftery <raftery at stat.washington.edu>
Maintainer: N. Dean <nemad at stat.washington.edu>
Citation (from within R,
enter citation("nudge")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("nudge")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("nudge")
| R Script | nudge Overview | |
| Reference Manual |
Details
| biocViews | DifferentialExpression, Microarray, Software, TwoChannel |
| Version | 1.32.0 |
| In Bioconductor since | BioC 1.8 (R-2.3) (10 years) |
| License | GPL-2 |
| Depends | |
| Imports | stats |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | nudge_1.32.0.tar.gz |
| Windows Binary | nudge_1.32.0.zip |
| Mac OS X 10.6 (Snow Leopard) | nudge_1.32.0.tgz |
| Mac OS X 10.9 (Mavericks) | nudge_1.32.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/nudge/tree/release-3.0 |
| Package Short Url | http://bioconductor.org/packages/nudge/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
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