To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("riboSeq")

In most cases, you don't need to download the package archive at all.

riboSeq

This is the development version of riboSeq.

Analysis of sequencing data from ribosome profiling experiments.

Bioconductor version: Development (3.0)

Plotting functions, frameshift detection and parsing of sequencing data from ribosome profiling experiments.

Author: Thomas J. Hardcastle

Maintainer: Thomas J. Hardcastle <tjh48 at cam.ac.uk>

Citation (from within R, enter citation("riboSeq")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("riboSeq")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("riboSeq")

 

PDF R Script riboSeq
PDF   Reference Manual
Text   NEWS

Details

biocViews Genetics, Sequencing, Software, Visualization
Version 0.99.14
License GPL-3
Depends R (>= 3.0.2), methods, GenomicRanges, abind
Imports
Suggests baySeq, BiocStyle, RUnit, BiocGenerics
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source riboSeq_0.99.14.tar.gz
Windows Binary riboSeq_0.99.14.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) riboSeq_0.99.14.tgz
Mac OS X 10.9 (Mavericks) riboSeq_0.99.14.tgz
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