- Home
- Bioconductor 3.0
- Experiment Packages
- Fletcher2013a
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Fletcher2013a")
In most cases, you don't need to download the package archive at all.
Fletcher2013a
|
This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see Fletcher2013a.
Gene expression data from breast cancer cells under FGFR2 signalling perturbation.
Bioconductor version: 3.0
The package Fletcher2013a contains time-course gene expression data from MCF-7 cells treated under different experimental systems in order to perturb FGFR2 signalling. The data comes from Fletcher et al. (Nature Comms 4:2464, 2013) where further details about the background and the experimental design of the study can be found.
Author: Mauro Castro, Michael Fletcher, Florian Markowetz and Kerstin Meyer.
Maintainer: Mauro Castro <mauro.a.castro at gmail.com>
Citation (from within R,
enter citation("Fletcher2013a")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("Fletcher2013a")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Fletcher2013a")
| R Script | Main vignette:Fletcher2013a | |
| Reference Manual |
Details
| biocViews | Cancer, ExperimentData, RNAExpressionData |
| Version | 1.1.1 |
| License | GPL (>= 2) |
| Depends | R (>= 2.15), limma |
| Imports | Biobase, VennDiagram, gplots, grid |
| LinkingTo | |
| Suggests | |
| SystemRequirements | |
| Enhances | |
| URL | http://dx.doi.org/10.1038/ncomms3464 |
| Depends On Me | Fletcher2013b |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | Fletcher2013a_1.1.1.tar.gz |
| Windows Binary | Fletcher2013a_1.1.1.zip |
| Mac OS X 10.6 (Snow Leopard) | Fletcher2013a_1.1.1.tgz |
| Mac OS X 10.9 (Mavericks) | Fletcher2013a_1.1.1.tgz |
| Subversion source | (username/password: readonly) |
| Package Short Url | http://bioconductor.org/packages/Fletcher2013a/ |
| Package Downloads Report | Download Stats |
Documentation »
Bioconductor
- Package vignettes and manuals.
- Workflows for learning and use.
- Course and conference material.
- Videos.
- Community resources and tutorials.
R / CRAN packages and documentation
Support »
Please read the posting guide. Post questions about Bioconductor to one of the following locations:
- Support site - for questions about Bioconductor packages
- Bioc-devel mailing list - for package developers
