PROMISE

DOI: 10.18129/B9.bioc.PROMISE    

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see PROMISE.

PRojection Onto the Most Interesting Statistical Evidence

Bioconductor version: 3.14

A general tool to identify genomic features with a specific biologically interesting pattern of associations with multiple endpoint variables as described in Pounds et. al. (2009) Bioinformatics 25: 2013-2019

Author: Stan Pounds <stanley.pounds at stjude.org>, Xueyuan Cao <xueyuan.cao at stjude.org>

Maintainer: Stan Pounds <stanley.pounds at stjude.org>, Xueyuan Cao <xueyuan.cao at stjude.org>

Citation (from within R, enter citation("PROMISE")):

Installation

To install this package, start R (version "4.1") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("PROMISE")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("PROMISE")

 

PDF R Script An introduction to PROMISE
PDF   Reference Manual

Details

biocViews GeneExpression, Microarray, MultipleComparison, OneChannel, Software
Version 1.46.0
In Bioconductor since BioC 2.6 (R-2.11) (12 years)
License GPL (>= 2)
Depends R (>= 3.1.0), Biobase, GSEABase
Imports Biobase, GSEABase, stats
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me CCPROMISE
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package PROMISE_1.46.0.tar.gz
Windows Binary PROMISE_1.46.0.zip
macOS 10.13 (High Sierra) PROMISE_1.46.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/PROMISE
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/PROMISE
Package Short Url https://bioconductor.org/packages/PROMISE/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: