DMRcatedata

DOI: 10.18129/B9.bioc.DMRcatedata    

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see DMRcatedata.

Data Package for DMRcate

Bioconductor version: 3.14

This package contains 9 data objects supporting functionality and examples of the Bioconductor package DMRcate.

Author: Tim Peters

Maintainer: Tim Peters <t.peters at garvan.org.au>

Installation

To install this package, start R (version "4.1") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("DMRcatedata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("DMRcatedata")

 

PDF	R Script	The DMRcate package user's guide
PDF		Reference Manual
Text		NEWS

Details

biocViews	ExperimentData, ExperimentHub, Genome, Homo_sapiens_Data, MicroarrayData, Mus_musculus_Data, SNPData, SequencingData
Version	2.12.0
License	GPL-3
Depends	R (>= 3.6), ExperimentHub
Imports	GenomicFeatures, Gviz, readxl, plyr, rtracklayer, IlluminaHumanMethylation450kanno.ilmn12.hg19, IlluminaHumanMethylationEPICanno.ilm10b4.hg19
LinkingTo
Suggests	knitr
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me	DMRcate
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	DMRcatedata_2.12.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/DMRcatedata
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/DMRcatedata
Package Short Url	https://bioconductor.org/packages/DMRcatedata/
Package Downloads Report	Download Stats