minfiData

DOI: 10.18129/B9.bioc.minfiData    

This package is for version 3.14 of Bioconductor; for the stable, up-to-date release version, see minfiData.

Example data for the Illumina Methylation 450k array

Bioconductor version: 3.14

Data from 6 samples across 2 groups from 450k methylation arrays.

Author: Kasper Daniel Hansen, Martin Aryee, Winston Timp

Maintainer: Kasper Daniel Hansen <kasperdanielhansen at gmail.com>

Installation

To install this package, start R (version "4.1") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("minfiData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual
Text		NEWS

Details

biocViews	ExperimentData, Homo_sapiens_Data, MethylationArrayData, MicroarrayData
Version	0.40.0
License	Artistic-2.0
Depends	R (>= 3.5.0), minfi(>= 1.21.2), IlluminaHumanMethylation450kmanifest, IlluminaHumanMethylation450kanno.ilmn12.hg19
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL
Depends On Me	methylationArrayAnalysis
Imports Me
Suggests Me	bigmelon, conumee, CopyNeutralIMA, ENmix, funtooNorm, Harman, mCSEA, MEAL, MethylAid, MethylAidData, minfi, missMethyl, MultiDataSet, shinyepico, shinyMethyl, skewr
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	minfiData_0.40.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/minfiData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/minfiData
Package Short Url	https://bioconductor.org/packages/minfiData/
Package Downloads Report	Download Stats