MBCB

DOI: 10.18129/B9.bioc.MBCB    

This package is for version 3.15 of Bioconductor; for the stable, up-to-date release version, see MBCB.

MBCB (Model-based Background Correction for Beadarray)

Bioconductor version: 3.15

This package provides a model-based background correction method, which incorporates the negative control beads to pre-process Illumina BeadArray data.

Author: Yang Xie <Yang.Xie at UTSouthwestern.edu>

Maintainer: Jeff Allen <Jeffrey.Allen at UTSouthwestern.edu>

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MBCB")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MBCB")

 

PDF	R Script	MBCB
PDF		Reference Manual

Details

biocViews	Microarray, Preprocessing, Software
Version	1.50.0
In Bioconductor since	BioC 2.7 (R-2.12) (12 years)
License	GPL (>= 2)
Depends	R (>= 2.9.0), tcltk, tcltk2
Imports	preprocessCore, stats, utils
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URL	http://www.utsouthwestern.edu
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	MBCB_1.50.0.tar.gz
Windows Binary	MBCB_1.50.0.zip
macOS Binary (x86_64)	MBCB_1.50.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/MBCB
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/MBCB
Package Short Url	https://bioconductor.org/packages/MBCB/
Package Downloads Report	Download Stats