LiquidAssociation

DOI: 10.18129/B9.bioc.LiquidAssociation  

LiquidAssociation

Bioconductor version: Release (3.16)

The package contains functions for calculate direct and model-based estimators for liquid association. It also provides functions for testing the existence of liquid association given a gene triplet data.

Author: Yen-Yi Ho <yho at jhsph.edu>

Maintainer: Yen-Yi Ho <yho at jhsph.edu>

Citation (from within R, enter citation("LiquidAssociation")):

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("LiquidAssociation")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("LiquidAssociation")

 

PDF R Script LiquidAssociation Vignette
PDF   Reference Manual

Details

biocViews CellBiology, GeneExpression, Genetics, Network, Pathways, Software, TimeCourse
Version 1.52.0
In Bioconductor since BioC 2.5 (R-2.10) (13.5 years)
License GPL (>=3)
Depends geepack, methods, yeastCC, org.Sc.sgd.db
Imports Biobase, graphics, grDevices, methods, stats
LinkingTo
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URL
Depends On Me fastLiquidAssociation
Imports Me
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Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package LiquidAssociation_1.52.0.tar.gz
Windows Binary LiquidAssociation_1.52.0.zip
macOS Binary (x86_64) LiquidAssociation_1.52.0.tgz
macOS Binary (arm64) LiquidAssociation_1.52.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/LiquidAssociation
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/LiquidAssociation
Bioc Package Browser https://code.bioconductor.org/browse/LiquidAssociation/
Package Short Url https://bioconductor.org/packages/LiquidAssociation/
Package Downloads Report Download Stats

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