Rcpi

DOI: 10.18129/B9.bioc.Rcpi  

Molecular Informatics Toolkit for Compound-Protein Interaction in Drug Discovery

Bioconductor version: Release (3.16)

A molecular informatics toolkit with an integration of bioinformatics and chemoinformatics tools for drug discovery.

Author: Nan Xiao [aut, cre], Dong-Sheng Cao [aut], Qing-Song Xu [aut]

Maintainer: Nan Xiao <me at nanx.me>

Citation (from within R, enter citation("Rcpi")):

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("Rcpi")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rcpi")

 

HTML Rcpi Quick Reference Card
HTML R Script Rcpi: R/Bioconductor Package as an Integrated Informatics Platform for Drug Discovery
PDF   Reference Manual
Text   NEWS
Text   LICENSE

Details

biocViews BiomedicalInformatics, Cheminformatics, DataImport, DataRepresentation, FeatureExtraction, GO, Proteomics, Software, SystemsBiology
Version 1.34.0
In Bioconductor since BioC 2.14 (R-3.1) (9 years)
License Artistic-2.0 | file LICENSE
Depends R (>= 3.0.2)
Imports stats, utils, methods, RCurl, rjson, foreach, doParallel, Biostrings, GOSemSim, rcdk (>= 3.3.8)
LinkingTo
Suggests knitr, rmarkdown, RUnit, BiocGenerics
SystemRequirements
Enhances
URL https://nanx.me/Rcpi/ https://github.com/nanxstats/Rcpi
BugReports https://github.com/nanxstats/Rcpi/issues
Depends On Me
Imports Me proteasy
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package Rcpi_1.34.0.tar.gz
Windows Binary Rcpi_1.34.0.zip
macOS Binary (x86_64) Rcpi_1.34.0.tgz
macOS Binary (arm64) Rcpi_1.34.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/Rcpi
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/Rcpi
Bioc Package Browser https://code.bioconductor.org/browse/Rcpi/
Package Short Url https://bioconductor.org/packages/Rcpi/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: