mogsa

DOI: 10.18129/B9.bioc.mogsa  

Multiple omics data integrative clustering and gene set analysis

Bioconductor version: Release (3.16)

This package provide a method for doing gene set analysis based on multiple omics data.

Author: Chen Meng

Maintainer: Chen Meng <mengchen18 at gmail.com>

Citation (from within R, enter citation("mogsa")):

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("mogsa")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("mogsa")

 

PDF R Script moCluster: Integrative clustering using multiple omics data
PDF R Script mogsa: gene set analysis on multiple omics data
PDF   Reference Manual
Text   NEWS

Details

biocViews Clustering, GeneExpression, PrincipalComponent, Software, StatisticalMethod
Version 1.32.0
In Bioconductor since BioC 3.1 (R-3.2) (8 years)
License GPL-2
Depends R (>= 3.4.0)
Imports methods, graphite, genefilter, BiocGenerics, gplots, GSEABase, Biobase, parallel, corpcor, svd, cluster, grDevices, graphics, stats, utils
LinkingTo
Suggests BiocStyle, knitr, org.Hs.eg.db
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report  

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package mogsa_1.32.0.tar.gz
Windows Binary mogsa_1.32.0.zip
macOS Binary (x86_64) mogsa_1.32.0.tgz
macOS Binary (arm64) mogsa_1.32.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/mogsa
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/mogsa
Bioc Package Browser https://code.bioconductor.org/browse/mogsa/
Package Short Url https://bioconductor.org/packages/mogsa/
Package Downloads Report Download Stats

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