MafH5.gnomAD.v3.1.1.GRCh38

DOI: 10.18129/B9.bioc.MafH5.gnomAD.v3.1.1.GRCh38  

Minor allele frequency data from gnomAD version 3.1.1 for GRCh38

Bioconductor version: Release (3.16)

Store minor allele frequency data from the Genome Aggregation Database (gnomAD version 3.1.1) for the human genome version GRCh38.

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafH5.gnomAD.v3.1.1.GRCh38")):

Installation

To install this package, start R (version "4.2") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MafH5.gnomAD.v3.1.1.GRCh38")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF   Reference Manual
Text   NEWS

Details

biocViews AnnotationData, Genetics, GenomicScores, Homo_sapiens
Version 3.13.1
License Artistic-2.0
Depends R (>= 4.0.0), GenomicScores(>= 2.3.4)
Imports utils, S4Vectors, IRanges, GenomicRanges, GenomeInfoDb, BSgenome, rhdf5, HDF5Array
LinkingTo
Suggests SNPlocs.Hsapiens.dbSNP149.GRCh38
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MafH5.gnomAD.v3.1.1.GRCh38_3.13.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Package Short Url https://bioconductor.org/packages/MafH5.gnomAD.v3.1.1.GRCh38/
Package Downloads Report Download Stats

Documentation »

Bioconductor

R / CRAN packages and documentation

Support »

Please read the posting guide. Post questions about Bioconductor to one of the following locations: