AssessORFData
This is the development version of AssessORFData; for the stable release version, see AssessORFData.
Data and Files for the AssessORF Package
Bioconductor version: Development (3.21)
This package provides access to mapping and results objects generated by the AssessORF package, as well as the genome sequences for the strains corresponding to those objects.
Author: Deepank Korandla [aut], Nicholas Cooley [cre] (ORCID:
Maintainer: Nicholas Cooley <npc19 at pitt.edu>
citation("AssessORFData")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("AssessORFData")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("AssessORFData")| Using AssessORFData | R Script | |
| Reference Manual |
Details
| biocViews | Bacillus_subtilis_Data, Escherichia_coli_Data, ExperimentData, Genome, OrganismData, Proteome, Pseudomonas_aeruginosa_Data, SequencingData, Staphylococcus_aureus_Data |
| Version | 1.25.1 |
| License | GPL-3 |
| Depends | R (>= 3.5.0), RSQLite (>= 1.1) |
| Imports | DECIPHER, utils |
| System Requirements | |
| URL |
See More
| Suggests | AssessORF, BiocStyle, knitr, rmarkdown |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | AssessORF |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | AssessORFData_1.25.1.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/AssessORFData |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/AssessORFData |
| Package Short Url | https://bioconductor.org/packages/AssessORFData/ |
| Package Downloads Report | Download Stats |