Jaffe AE, Murakami P, Lee H, Leek JT, Fallin DM, Feinberg AP and Irizarry RA (2012). “Bump hunting to identify differentially methylated regions in epigenetic epidemiology studies.” International journal of epidemiology, 41(1), pp. 200–209. doi: 10.1093/ije/dyr238.

Aryee MJ, Jaffe AE, Corrada-Bravo H, Ladd-Acosta C, Feinberg AP, Hansen KD and Irizarry RA (2014). “Minfi: A flexible and comprehensive Bioconductor package for the analysis of Infinium DNA Methylation microarrays.” Bioinformatics, 30(10), pp. 1363–1369. doi: 10.1093/bioinformatics/btu049.