To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("DEFormats")

In most cases, you don't need to download the package archive at all.

DEFormats

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see DEFormats.

Differential gene expression data formats converter

Bioconductor version: 3.4

Covert between different data formats used by differential gene expression analysis tools.

Author: Andrzej Oleś

Maintainer: Andrzej Oleś <andrzej.oles at embl.de>

Citation (from within R, enter citation("DEFormats")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("DEFormats")

HTML	R Script	Differential gene expression data formats converter
PDF		Reference Manual
Text		NEWS

biocViews	DifferentialExpression, GeneExpression, RNASeq, Sequencing, Software, Transcription
Version	1.2.0
In Bioconductor since	BioC 3.3 (R-3.3) (1 year)
License	GPL-3
Depends
Imports	checkmate, DESeq2, edgeR(>= 3.13.4), GenomicRanges, methods, stats, SummarizedExperiment
LinkingTo
Suggests	BiocStyle(>= 1.8.0), knitr, rmarkdown, testthat
SystemRequirements
Enhances
URL	https://github.com/aoles/DEFormats
BugReports	https://github.com/aoles/DEFormats/issues
Depends On Me
Imports Me	regionReport
Suggests Me
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	DEFormats_1.2.0.tar.gz
Windows Binary	DEFormats_1.2.0.zip
Mac OS X 10.9 (Mavericks)	DEFormats_1.2.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/DEFormats/tree/release-3.4
Package Short Url	http://bioconductor.org/packages/DEFormats/
Package Downloads Report	Download Stats

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