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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("miRNAmeConverter")
In most cases, you don't need to download the package archive at all.
miRNAmeConverter
|
This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see miRNAmeConverter.
Convert miRNA Names to Different miRBase Versions
Bioconductor version: 3.4
Package containing an S4 class for translating mature miRNA names to different miRBase versions, sequence retrieval, checking names for validity and detecting miRBase version of a given set of names (data from http://www.mirbase.org/).
Author: Stefan Haunsberger [aut, cre]
Maintainer: Stefan J. Haunsberger <stefan.haunsberger at gmail.com>
Citation (from within R,
enter citation("miRNAmeConverter")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("miRNAmeConverter")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("miRNAmeConverter")
| R Script | miRNAmeConverter-vignette | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Preprocessing, Software, miRNA |
| Version | 1.2.0 |
| In Bioconductor since | BioC 3.3 (R-3.3) (1 year) |
| License | Artistic-2.0 |
| Depends | miRBaseVersions.db |
| Imports | DBI, AnnotationDbi |
| LinkingTo | |
| Suggests | methods, testthat, knitr, rmarkdown |
| SystemRequirements | |
| Enhances | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Package Source | miRNAmeConverter_1.2.0.tar.gz |
| Windows Binary | miRNAmeConverter_1.2.0.zip |
| Mac OS X 10.9 (Mavericks) | miRNAmeConverter_1.2.0.tgz |
| Subversion source | (username/password: readonly) |
| Git source | https://github.com/Bioconductor-mirror/miRNAmeConverter/tree/release-3.4 |
| Package Short Url | http://bioconductor.org/packages/miRNAmeConverter/ |
| Package Downloads Report | Download Stats |
Documentation »
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