To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5")

In most cases, you don't need to download the package archive at all.

MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5

This package is for version 3.4 of Bioconductor; for the stable, up-to-date release version, see MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5.

Minor allele frequency data from ExAC subset of non-TCGA exomes for hs37d5

Bioconductor version: 3.4

Store minor allele frequency data from the Exome Aggregation Consortium subset of non-TCGA exomes for single nucleotide variants in the human genome version hs37d5.

Author: Robert Castelo

Maintainer: Robert Castelo <robert.castelo at upf.edu>

Citation (from within R, enter citation("MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5")):

Installation

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5")

Documentation


PDF		Reference Manual

Details

biocViews	AnnotationData, Genetics, Homo_sapiens, MafDb
Version	3.4.0
License	Artistic-2.0
Depends	R (>= 3.0.0), VariantFiltering(>= 1.9.14)
Imports	utils, IRanges, GenomicRanges, BSgenome
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SystemRequirements
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Depends On Me
Imports Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5_3.4.0.tar.gz
Windows Binary
Mac OS X 10.9 (Mavericks)
Package Short Url	http://bioconductor.org/packages/MafDb.ExAC.r0.3.1.nonTCGA.snvs.hs37d5/
Package Downloads Report	Download Stats

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