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To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("discordant")
In most cases, you don't need to download the package archive at all.
discordant
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The Discordant Method: A Novel Approach for Differential Correlation
Bioconductor version: Release (3.5)
Discordant is a method to determine differential correlation of molecular feature pairs from -omics data using mixture models. Algorithm is explained further in Siska et al.
Author: Charlotte Siska [cre,aut], Katerina Kechris [aut]
Maintainer: Charlotte Siska <siska.charlotte at gmail.com>
Citation (from within R,
enter citation("discordant")):
Installation
To install this package, start R and enter:
## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("discordant")
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("discordant")
| R Script | Discordant | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | BiologicalQuestion, Genetics, Microarray, RNASeq, Software, StatisticalMethod, mRNAMicroarray |
| Version | 1.0.0 |
| In Bioconductor since | BioC 3.5 (R-3.4) (0.5 years) |
| License | GPL (>= 2) |
| Depends | R (>= 3.4) |
| Imports | Biobase, stats, biwt, gtools, MASS, tools |
| LinkingTo | |
| Suggests | BiocStyle, knitr |
| SystemRequirements | |
| Enhances | |
| URL | https://github.com/siskac/discordant |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | discordant_1.0.0.tar.gz |
| Windows Binary | discordant_1.0.0.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | discordant_1.0.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/discordant |
| Package Short Url | http://bioconductor.org/packages/discordant/ |
| Package Downloads Report | Download Stats |
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