To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("pathRender")
In most cases, you don't need to download the package archive at all.
Bioconductor version: Release (3.5)
build graphs from pathway databases, render them by Rgraphviz.
Author: Li Long <lilong at isb-sib.ch>
Maintainer: Vince Carey <stvjc at channing.harvard.edu>
Citation (from within R,
enter citation("pathRender")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("pathRender")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("pathRender")
R Script | pathRender overview | |
R Script | pathway graphs colored by expression map | |
Reference Manual | ||
Text | NEWS |
biocViews | GraphAndNetwork, Pathways, Software, Visualization |
Version | 1.44.0 |
In Bioconductor since | BioC 1.8 (R-2.3) (11.5 years) |
License | LGPL |
Depends | graph, Rgraphviz, RColorBrewer, cMAP, AnnotationDbi, methods, stats4 |
Imports | |
LinkingTo | |
Suggests | ALL, hgu95av2.db |
SystemRequirements | |
Enhances | |
URL | http://www.bioconductor.org |
Depends On Me | |
Imports Me | |
Suggests Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | pathRender_1.44.0.tar.gz |
Windows Binary | pathRender_1.44.0.zip |
Mac OS X 10.11 (El Capitan) | pathRender_1.44.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/pathRender |
Package Short Url | http://bioconductor.org/packages/pathRender/ |
Package Downloads Report | Download Stats |
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