This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see DelayedDataFrame.
Bioconductor version: 3.9
Based on the standard DataFrame metaphor, we are trying to implement the feature of delayed operation on the DelayedDataFrame, with a slot of lazyIndex, which saves the mapping indexes for each column of DelayedDataFrame. Methods like show, validity check, [/[[ subsetting, rbind/cbind are implemented for DelayedDataFrame to be operated around lazyIndex. The listData slot stays untouched until a realization call e.g., DataFrame constructor OR as.list() is invoked.
Author: Qian Liu [aut, cre], Hervé Pagès [ctb], Martin Morgan [ctb]
Maintainer: Qian Liu <Qian.Liu at roswellpark.org>
Citation (from within R,
enter citation("DelayedDataFrame")
):
To install this package, start R (version "3.6") and enter:
if (!requireNamespace("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("DelayedDataFrame")
For older versions of R, please refer to the appropriate Bioconductor release.
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("DelayedDataFrame")
HTML | R Script | DelayedDataFrame |
Reference Manual | ||
Text | NEWS |
biocViews | DataRepresentation, Infrastructure, Software |
Version | 1.0.0 |
In Bioconductor since | BioC 3.9 (R-3.6) (< 6 months) |
License | GPL-3 |
Depends | R (>= 3.6), S4Vectors(>= 0.19.12), DelayedArray(>= 0.7.5) |
Imports | methods, stats, BiocGenerics |
LinkingTo | |
Suggests | testthat, knitr, rmarkdown, SeqArray, GDSArray |
SystemRequirements | |
Enhances | |
URL | https://github.com/Bioconductor/DelayedDataFrame |
BugReports | https://github.com/Bioconductor/DelayedDataFrame/issues |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me | |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | DelayedDataFrame_1.0.0.tar.gz |
Windows Binary | DelayedDataFrame_1.0.0.zip (32- & 64-bit) |
Mac OS X 10.11 (El Capitan) | DelayedDataFrame_1.0.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/DelayedDataFrame |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/DelayedDataFrame |
Package Short Url | https://bioconductor.org/packages/DelayedDataFrame/ |
Package Downloads Report | Download Stats |
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