ScISI

DOI: 10.18129/B9.bioc.ScISI    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see ScISI.

In Silico Interactome

Bioconductor version: 3.9

Package to create In Silico Interactomes

Author: Tony Chiang <tchiang at fhcrc.org>

Maintainer: Tony Chiang <tchiang at fhcrc.org>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ScISI")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ScISI")

 

PDF	R Script	ScISI Vignette
PDF		Reference Manual

Details

biocViews	DecisionTree, GraphAndNetwork, NetworkInference, Proteomics, Software
Version	1.56.0
In Bioconductor since	BioC 1.8 (R-2.3) (13.5 years)
License	LGPL
Depends	R (>= 2.10), GO.db, RpsiXML, annotate, apComplex
Imports	AnnotationDbi, GO.db, RpsiXML, annotate, methods, org.Sc.sgd.db, utils
LinkingTo
Suggests	ppiData, xtable
SystemRequirements
Enhances
URL
Depends On Me	PCpheno, ppiStats, SLGI
Imports Me	PCpheno, SLGI
Suggests Me	RpsiXML
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ScISI_1.56.0.tar.gz
Windows Binary	ScISI_1.56.0.zip
Mac OS X 10.11 (El Capitan)	ScISI_1.56.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/ScISI
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ScISI
Package Short Url	https://bioconductor.org/packages/ScISI/
Package Downloads Report	Download Stats