coGPS

DOI: 10.18129/B9.bioc.coGPS    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see coGPS.

cancer outlier Gene Profile Sets

Bioconductor version: 3.9

Gene Set Enrichment Analysis of P-value based statistics for outlier gene detection in dataset merged from multiple studies

Author: Yingying Wei, Michael Ochs

Maintainer: Yingying Wei <ywei at jhsph.edu>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("coGPS")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("coGPS")

 

PDF	R Script	coGPS
PDF		Reference Manual
Text		NEWS

Details

biocViews	DifferentialExpression, Microarray, Software
Version	1.28.0
In Bioconductor since	BioC 2.10 (R-2.15) (7.5 years)
License	GPL-2
Depends	R (>= 2.13.0)
Imports	graphics, grDevices
LinkingTo
Suggests	limma
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	coGPS_1.28.0.tar.gz
Windows Binary	coGPS_1.28.0.zip
Mac OS X 10.11 (El Capitan)	coGPS_1.28.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/coGPS
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/coGPS
Package Short Url	https://bioconductor.org/packages/coGPS/
Package Downloads Report	Download Stats