ternarynet

DOI: 10.18129/B9.bioc.ternarynet    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see ternarynet.

Ternary Network Estimation

Bioconductor version: 3.9

A computational Bayesian approach to ternary gene regulatory network estimation from gene perturbation experiments.

Author: Matthew N. McCall <mccallm at gmail.com>, Anthony Almudevar <Anthony_Almudevar at urmc.rochester.edu>, David Burton <David_Burton at urmc.rochester.edu>, Harry Stern <harry.stern at rochester.edu>

Maintainer: Matthew N. McCall <mccallm at gmail.com>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ternarynet")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ternarynet")

 

PDF	R Script	ternarynet: A Computational Bayesian Approach to Ternary Network Estimation
PDF		Reference Manual

Details

biocViews	CellBiology, GraphAndNetwork, Software
Version	1.28.0
In Bioconductor since	BioC 2.10 (R-2.15) (7.5 years)
License	GPL (>= 2)
Depends	R (>= 2.10.0), methods
Imports	utils, igraph
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Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	ternarynet_1.28.0.tar.gz
Windows Binary	ternarynet_1.28.0.zip
Mac OS X 10.11 (El Capitan)	ternarynet_1.28.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/ternarynet
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/ternarynet
Package Short Url	https://bioconductor.org/packages/ternarynet/
Package Downloads Report	Download Stats