webbioc

DOI: 10.18129/B9.bioc.webbioc    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see webbioc.

Bioconductor Web Interface

Bioconductor version: 3.9

An integrated web interface for doing microarray analysis using several of the Bioconductor packages. It is intended to be deployed as a centralized bioinformatics resource for use by many users. (Currently only Affymetrix oligonucleotide analysis is supported.)

Author: Colin A. Smith <colin at colinsmith.org>

Maintainer: Colin A. Smith <colin at colinsmith.org>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("webbioc")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("webbioc")

 

PDF		webbioc Demo Script
PDF		webbioc Overview
PDF		Reference Manual

Details

biocViews	DifferentialExpression, Infrastructure, Microarray, OneChannel, Software
Version	1.56.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier (> 14.5 years)
License	GPL (>= 2)
Depends	R (>= 1.8.0), Biobase, affy, multtest, annaffy, vsn, gcrma, qvalue
Imports	multtest, qvalue, stats, utils, BiocManager
LinkingTo
Suggests
SystemRequirements	Unix, Perl (>= 5.6.0), Netpbm
Enhances
URL	http://www.bioconductor.org/
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	webbioc_1.56.0.tar.gz
Windows Binary	webbioc_1.56.0.zip
Mac OS X 10.11 (El Capitan)	webbioc_1.56.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/webbioc
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/webbioc
Package Short Url	https://bioconductor.org/packages/webbioc/
Package Downloads Report	Download Stats