silva128.1MgDb

DOI: 10.18129/B9.bioc.silva128.1MgDb    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see silva128.1MgDb.

SILVA SSR rRNA release 128.1 Annotation Data

Bioconductor version: 3.9

Metagenome annotation package with for the SILVA SSR rRNA database release 128.1, Bacterial and Archeal sequences. Contains a MgDb-class object, defined in the metagenomeFeatures package.

Author: Nathan D. Olson <nolson at umias.umd.edu>, Joseph Nathaniel Paulson, Hector Corrada-Bravo

Maintainer: Nathan D. Olson <nolson at umiacs.umd.edu>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("silva128.1MgDb")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual
Text		README

Details

biocViews	AnnotationData, Metagenomics, Microbiome, Sequencing
Version	1.00.0
License	Artistic-2.0
Depends	R (>= 3.5)
Imports	metagenomeFeatures(>= 1.99.9)
LinkingTo
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SystemRequirements
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URL	https://github.com/HCBravoLab/silva128.1MgDb
BugReports	https://github.com/HCBravoLab/silva128.1MgDb/issues
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	silva128.1MgDb_1.00.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url	https://bioconductor.org/packages/silva128.1MgDb/
Package Downloads Report	Download Stats