JASPAR2016

DOI: 10.18129/B9.bioc.JASPAR2016    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see JASPAR2016.

Data package for JASPAR 2016

Bioconductor version: 3.9

Data package for JASPAR 2016. To search this databases, please use the package TFBSTools (>= 1.8.1).

Author: Ge Tan <ge.tan09 at imperial.ac.uk>

Maintainer: Ge Tan <ge.tan09 at imperial.ac.uk>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("JASPAR2016")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	ExperimentData, GeneRegulation, MotifAnnotation
Version	1.12.0
License	GPL-2
Depends	R (>= 3.2.2), methods
Imports
LinkingTo
Suggests
SystemRequirements
Enhances
URL	http://jaspar.genereg.net/
Depends On Me
Imports Me	esATAC
Suggests Me	CAGEWorkflow, chromVAR, TFBSTools
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	JASPAR2016_1.12.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/JASPAR2016
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/JASPAR2016
Package Short Url	https://bioconductor.org/packages/JASPAR2016/
Package Downloads Report	Download Stats