curatedCRCData

DOI: 10.18129/B9.bioc.curatedCRCData    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see curatedCRCData.

Colorectal Cancer Gene Expression Analysis

Bioconductor version: 3.9

The curatedCRC package provides relevant functions and data for gene expression analysis in patients with colorectal cancer.

Author: Princy Parsana, Markus Riester, Curtis Huttenhower, Levi Waldron

Maintainer: Princy Parsana <princyparsana at jhu.edu>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("curatedCRCData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("curatedCRCData")

 

PDF	R Script	curatedCRCData
PDF		Reference Manual
Text		NEWS

Details

biocViews	Cancer, Colorectal, ExperimentData, RNAExpressionData, TCGA
Version	2.16.0
License	Artistic-2.0
Depends	R (>= 2.10.0), nlme
Imports	BiocGenerics
LinkingTo
Suggests	survival, RUnit, metafor, genefilter, logging, sva, xtable, futile.logger, BiocStyle
SystemRequirements
Enhances
URL	https://bitbucket.org/biobakery/curatedcrcdata
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	curatedCRCData_2.16.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Source Repository	git clone https://git.bioconductor.org/packages/curatedCRCData
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/curatedCRCData
Package Short Url	https://bioconductor.org/packages/curatedCRCData/
Package Downloads Report	Download Stats