iSEEhex

This is the development version of iSEEhex; for the stable release version, see iSEEhex.

iSEE extension for summarising data points in hexagonal bins

Bioconductor version: Development (3.21)

This package provides panels summarising data points in hexagonal bins for `iSEE`. It is part of `iSEEu`, the iSEE universe of panels that extend the `iSEE` package.

Author: Kevin Rue-Albrecht [aut, cre] (ORCID: ), Charlotte Soneson [aut] (ORCID: ), Federico Marini [aut] (ORCID: ), Aaron Lun [aut] (ORCID: )

Maintainer: Kevin Rue-Albrecht <kevinrue67 at gmail.com>

Citation (from within R, enter citation("iSEEhex")):

Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("iSEEhex")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("iSEEhex")

The iSEEhex package	HTML	R Script
Reference Manual	PDF
NEWS	Text

Need some help? Ask on the Bioconductor Support site!

Details

biocViews	Infrastructure, Software
Version	1.9.0
In Bioconductor since	BioC 3.16 (R-4.2) (2 years)
License	Artistic-2.0
Depends	SummarizedExperiment, iSEE
Imports	ggplot2, hexbin, methods, shiny
System Requirements
URL	https://github.com/iSEE/iSEEhex
Bug Reports	https://support.bioconductor.org/t/iSEEhex

Suggests	BiocStyle, covr, knitr, RefManageR, rmarkdown, sessioninfo, testthat (>= 3.0.0), scRNAseq, scater
Linking To
Enhances
Depends On Me	iSEEu
Imports Me
Suggests Me
Links To Me
Build Report	Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	iSEEhex_1.9.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository	git clone https://git.bioconductor.org/packages/iSEEhex
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/iSEEhex
Bioc Package Browser	https://code.bioconductor.org/browse/iSEEhex/
Package Short Url	https://bioconductor.org/packages/iSEEhex/
Package Downloads Report	Download Stats