To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("frma")

In most cases, you don't need to download the package archive at all.

frma

This package is for version 3.0 of Bioconductor; for the stable, up-to-date release version, see frma.

Frozen RMA and Barcode

Bioconductor version: 3.0

Preprocessing and analysis for single microarrays and microarray batches.

Author: Matthew N. McCall <mccallm at gmail.com>, Rafael A. Irizarry <rafa at jhu.edu>, with contributions from Terry Therneau

Maintainer: Matthew N. McCall <mccallm at gmail.com>

Citation (from within R, enter citation("frma")):

To install this package, start R and enter:

## try http:// if https:// URLs are not supported
source("https://bioconductor.org/biocLite.R")
biocLite("frma")

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("frma")

PDF	R Script	frma: Preprocessing for single arrays and array batches
PDF		Reference Manual

biocViews	Microarray, Preprocessing, Software
Version	1.18.0
In Bioconductor since	BioC 2.6 (R-2.11) (6 years)
License	GPL (>= 2)
Depends	R (>= 2.10.0), Biobase(>= 2.6.0)
Imports	Biobase, MASS, DBI, affy, methods, oligo, oligoClasses, preprocessCore, utils, BiocGenerics
LinkingTo
Suggests	hgu133afrmavecs, frmaExampleData
SystemRequirements
Enhances
URL	http://bioconductor.org
Depends On Me
Imports Me	ChIPXpress, DeSousa2013
Suggests Me	antiProfilesData, frmaTools
Build Report

Follow Installation instructions to use this package in your R session.

Package Source	frma_1.18.0.tar.gz
Windows Binary	frma_1.18.0.zip
Mac OS X 10.6 (Snow Leopard)	frma_1.18.0.tgz
Mac OS X 10.9 (Mavericks)	frma_1.18.0.tgz
Subversion source	(username/password: readonly)
Git source	https://github.com/Bioconductor-mirror/frma/tree/release-3.0
Package Short Url	http://bioconductor.org/packages/frma/
Package Downloads Report	Download Stats

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