To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("CAMERA")
In most cases, you don't need to download the package archive at all.
Bioconductor version: Release (3.5)
Annotation of peaklists generated by xcms, rule based annotation of isotopes and adducts, isotope validation, EIC correlation based tagging of unknown adducts and fragments
Author: Carsten Kuhl, Ralf Tautenhahn, Hendrik Treutler, Steffen Neumann {ckuhl|htreutle|sneumann}@ipb-halle.de, rtautenh@scripps.edu
Maintainer: Steffen Neumann <sneumann at ipb-halle.de>
Citation (from within R,
enter citation("CAMERA")
):
To install this package, start R and enter:
## try http:// if https:// URLs are not supported source("https://bioconductor.org/biocLite.R") biocLite("CAMERA")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("CAMERA")
Isotope pattern validation with CAMERA | ||
Isotope pattern validation with CAMERA | ||
R Script | Molecule Identification with CAMERA | |
Reference Manual | ||
Text | NEWS |
biocViews | MassSpectrometry, Metabolomics, Software |
Version | 1.32.0 |
In Bioconductor since | BioC 2.4 (R-2.9) (8.5 years) |
License | GPL (>= 2) |
Depends | R (>= 2.1.0), methods, Biobase, xcms(>= 1.13.5) |
Imports | methods, xcms, RBGL, graph, graphics, grDevices, stats, utils, Hmisc, igraph |
LinkingTo | |
Suggests | faahKO, RUnit, BiocGenerics |
SystemRequirements | |
Enhances | Rmpi, snow |
URL | http://msbi.ipb-halle.de/msbi/CAMERA/ |
BugReports | https://github.com/sneumann/CAMERA/issues/new |
Depends On Me | flagme, IPO, LOBSTAHS, MAIT, metaMS, PtH2O2lipids |
Imports Me | |
Suggests Me | mtbls2, RMassBank, ropls |
Build Report |
Follow Installation instructions to use this package in your R session.
Source Package | CAMERA_1.32.0.tar.gz |
Windows Binary | CAMERA_1.32.0.zip (32- & 64-bit) |
Mac OS X 10.11 (El Capitan) | CAMERA_1.32.0.tgz |
Source Repository | git clone https://git.bioconductor.org/packages/CAMERA |
Package Short Url | http://bioconductor.org/packages/CAMERA/ |
Package Downloads Report | Download Stats |
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