AgiMicroRna

DOI: 10.18129/B9.bioc.AgiMicroRna    

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see AgiMicroRna.

Processing and Differential Expression Analysis of Agilent microRNA chips

Bioconductor version: 3.9

Processing and Analysis of Agilent microRNA data

Author: Pedro Lopez-Romero <plopez at cnic.es>

Maintainer: Pedro Lopez-Romero <plopez at cnic.es>

Installation

To install this package, start R (version "3.6") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AgiMicroRna")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("AgiMicroRna")

 

PDF	R Script	AgiMicroRna
PDF		Reference Manual

Details

biocViews	AgilentChip, DifferentialExpression, Microarray, OneChannel, Preprocessing, Software
Version	2.34.0
In Bioconductor since	BioC 2.5 (R-2.10) (10 years)
License	GPL-3
Depends	R (>= 2.10), methods, Biobase, limma, affy(>= 1.22), preprocessCore, affycoretools
Imports	Biobase
LinkingTo
Suggests	geneplotter, marray, gplots, gtools, gdata, codelink
SystemRequirements
Enhances
URL
Depends On Me
Imports Me
Suggests Me
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	AgiMicroRna_2.34.0.tar.gz
Windows Binary	AgiMicroRna_2.34.0.zip
Mac OS X 10.11 (El Capitan)	AgiMicroRna_2.34.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/AgiMicroRna
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/AgiMicroRna
Package Short Url	https://bioconductor.org/packages/AgiMicroRna/
Package Downloads Report	Download Stats